fujitsu:alphacod:internal:readers

High Level View of AlphaCOD readers

Shimadzu

  • Type: Chromatography/Mass Spectrometry
  • Format: *.lcd (LabSolutions Data File), *.qgd
  • Reader: Fujitsu C# library ⇒ Shimadzu DLL (Windows)

Bruker

  • Type: Mass Spectrometry
  • Format: *.xms, *.sqlitefiles in *.d folders
  • Reader: Fujitsu Python library (Linux)

Waters

  • Type: Chromatography/Mass Spectrometry, MSMS
  • Format: *.raw folders (MassLynx Data File)
  • Reader: LGPL Python library (rainbow.py) ⇒ Fujitsu Python library (Linux)

Agilent

  • Type: Chromatography/Mass Spectrometry, MSMS, MS Simple Quadripole
  • Format: *.D (ChemStation Data File)
  • Reader: Fujitsu Python library (Linux)

Jeol

  • Type: Mass Spectrometry
  • Format: *.bin files in *.JQD folders
  • Reader: Fujitsu Python library (Linux)

Thermofisher

  • Type: Mass Spectrometry
  • Format: *.raw (Xcalibur Data File)
  • Reader: Fujitsu Python library ⇒ MIT Python (fisher.py ⇒ Thermofisher DLL (Windows)) (to be replaced ?)

Sciex

  • Type: Mass Spectrometry
  • Format: *.wiff (Analyst Data File)
  • Reader: ProteoWizard ⇒ wine msconvert (Windows) ⇒ Sciex converter ⇒ mzml

Other

  • Format: *.mzml files (standard mass spectrometric data format)
  • Reader: Fujitsu Python library (Linux)
fujitsu/alphacod/internal/readers.txt · Last modified: 2025/07/10 10:07 by 127.0.0.1